Heritage Pipe Organs was founded in 1987 by Donald Bohall, former Service Manager for the Schlicker Organ Company. In 2001, Heritage was acquired by Louis Rothenbueger and Larry Ploetz partners in Rothenbueger & Ploetz Pipe Organ Service. The 2011 retirement of Louis Rothenbueger resulted in the merging of Rothenbueger & Ploetz with Heritage Pipe Organs.

In spring of 2017 Heritage Pipe Organs was acquired by Eric Miller and Charlie Porter and now serves over 250 churches, schools, and individuals in the greater Buffalo, NY area.